Of the 3 major year’s best anthologies, 3 stories made it into two of them:

“The Hand Is Quicker”, Elizabeth Bear (The Book of Silverberg) – Horton and Dozois
“Shadow Flock”, Greg Egan (Coming Soon Enough) – Strahan and Dozois
“Collateral”, Peter Watts (Upgraded) – Horton and Strahan

20 stories from the Locus list were included in one of the anthologies:

Horton:

“A Better Way to Die”, Paul Cornell (Rogues)
“The Magician and Laplace’s Demon”, Tom Crosshill (Clarkesworld 12/14)
“Petard: A Tale of Just Deserts”, Cory Doctorow (Twelve Tomorrows)
“Skull and Hyssop“, Kathleen Jennings (Lady Churchill’s Rosebud Wristlet 12/14)
“A Guide to the Fruits of Hawai’i”, Alaya Dawn Johnson (F&SF 7-8/14)
“Schools of Clay”, Derek Künsken (Asimov’s 2/14)
“Wine”, Yoon Ha Lee (Clarkesworld 1/14)
“I Can See Right Through You”, Kelly Link (McSweeney’s #48)
“Heaven Thunders the Truth”, K.J. Parker (Beneath Ceaseless Skies 10/2/14)

Strahan:

“Tough Times All Over”, Joe Abercrombie (Rogues)
“Ten Rules for Being an Intergalactic Smuggler (the Successful Kind)”, Holly Black (Monstrous Affections)
“Interstate Love Song (Murder Ballad No.8)”, Caitlín R. Kiernan (Sirenia Digest)
“Kheldyu”, Karl Schroeder (Reach for Infinity)
“Tawny Petticoats”, Michael Swanwick (Rogues)
“The Insects of Love”, Genevieve Valentine (Tor.com 5/28/14)
“The Devil in America”, Kai Ashante Wilson (Tor.com 4/2/14)

Dozois:

“The Rider”, Jérôme Cigut (F&SF 9-10/14)
“The Fifth Dragon”, Ian McDonald (Reach for Infinity)
“Thing and Sick”, Adam Roberts (Solaris Rising3)
“The Colonel”, Peter Watts (Tor.com 7/29/14)